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… projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. Bowen’s expertise in spectral … Northen, T., & Bowen, B. (2017). OpenMSI Arrayed Analysis Toolkit: analyzing spatially defined samples using mass …

… to gain and harness energy. As reported January 28, 2019 in Nature Communications , two research teams joined forces and data sets to describe bacterial genomes for related …

Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, … Cristhian Gutierrez and Bryan Rangel Alvarez are both  California Alliance for Minority Participation (CAMP) students …

… the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and … Institute in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in … American Heart Association, Medical Research Council (UK),  Nature, Cell , Nature Genetics , Nature Methods ,  Genome …

… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever … Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a semi-automated stable isotope probing pipeline identifies … 199 Needham, D.M. et al. 2019. A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine …

… of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … data from newly sequenced genomes, they also built a high-quality phylogenetic tree for  Dothideomycetes . The data …

… accepted through JGI’s calls. Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, JGI User … University of California, Davis proposes to develop high quality reference genomes for 10 individuals from each of …

… them to adapt to life on land. Learning that these genetic tools existed in close algal relatives  to terrestrial … of how plants adapted to terrestrial life paves the way for innovations in sustainable agriculture and clean energy. … (grant agreement no. 101001675). … Zygnema on PhycoCosm … Dataset …

… secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to … Interspaced Short Palindromic Repeats) is the leading tool for accurately editing genomes, its effectiveness has … monitor loss- and gain-of-function. The study’s analytical data shows peaks and valleys in secondary metabolites as …

… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that there is … Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein …

… from the ACTIVE SITES Research Center (ACSI), the Centre for Water and Environmental Research (ZWU) of the University … biology, single cell and systems biology, omics, and big data science, machine learning for experimental science, … methods in conjunction with microfluidics into a powerful tool to address many of the research questions discussed,” …

New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent … called methanogenesis. Methanogenic microorganisms therefore play a critical role in the global carbon cycle, and … by methanogenesis. Both studies were recently published in  Nature .  Researchers started by collecting samples from …