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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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A Community Resource for Secondary Metabolite Researchers
… Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of researchers tracked the impact of a … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), as part of Hallam’s …
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Streamlining Regulon Identification in Bacteria
… transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Transcription factors … factor. Predicting those relationships bioinformatically is almost impossible, and the experimental process for …
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JGI Announces 2025 New Investigator Portfolio
… any previously accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with … fungi, the effects of biochar on rhizosphere microbiomes, and the metabolic pathways of algae. They will …
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From Competition to Cooperation
… symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, … work was led by a consortium of researchers from the French National Institute for Agriculture, Food and Environment … generated by the JGI more than a decade ago. Having these datasets will assist researchers in moving toward functional …
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Ancient Algae Reveal Secrets of Plant Evolution
… helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal … drive a strong bioeconomy. Summary Through the Community Science Program of the U.S. Department of Energy (DOE) Joint … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), scientists sequenced the …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… for developing ​​bio-based industrial products.    The Science Scientists have fully decoded the genome of an … Because of the ease with which the alga can be genetically engineered, it has the potential to be imbued with … designer chemicals and bio-based materials essential for national security, supply-chain resilience and diversifying …
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Approved Proposals
… proposals from previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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Natural soil microbiome variation affects spring foliar phenology with consequences for plant productivity and climate‐driven range shifts
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The Power of One, Amplified
… single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), employed single-cell … of samples, while single cell approaches have been typically used as a complement to isolate sequencing, i.e. when …
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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for growing algae as a source of … if target yields could be achieved. Researchers at many national laboratories are working toward that goal. In a … sequence and then analyze the genomes and multi-omics datasets for algae that can be used for large-scale …
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