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… research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new … approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the …

… from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. … of primary users — 2,475 — had active proposals with us, along with more than 15,000 secondary users who made use of …

… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying them to environmental and energy challenges. But not all scientists have … and her own as an early career researcher. “We were able to study hydrocarbon biosynthesis at a scale that would …

… data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree … Remarkable Similarity Despite Vast Diversity For this study, researchers collected soil samples from four sites: … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …

… JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in professional development enrichment activities. For some students in … Evolution of the Mitochondria Internship … Cross Species Integration of Single Cell Transcriptomes …

… programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy … available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes cycle carbon and …

… of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint …

… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in several Lab …

… Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, … Scale call. This portfolio accelerates bioenergy innovation through genomic discovery across diverse organisms and … Microbiome Data Collaborative (NMDC) to produce open metagenomics data. Taking the JGI’s call for large-scale …

… Gareth Gillard, Audrey Goeckner, Jennifer Goff, Sarah Gonzalez Henao, Yang Hai, Julia G. Harenčár, Sarah Hu; [Row … Elina Laanto, Rose A. Marks, Daniel Mok, Elise Morrison, Jake Nash, Reuben J. Peters, Morito Sakuma; [Bottom … these researchers will harness capabilities including metagenomics, metatranscriptomics and genome assembly to …

… assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like … hard to make them work for the kinds of plant samples we study — and even go beyond, putting four different species … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …

… issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five … beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell … and experimental approaches with the aim of eventually studying virus-host dynamics in nature. In the last few …