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The JGI announces 2024 awardees for our Community Science Program annual call
… Corales, Hugh Cross, Megan DeMarche, Joanne Emerson, Matthew Hudson, Megan Keller and Julia Kelliher; [below] … to announce the fifteen scientists selected for our 2024 Community Science Program Annual Call. “It’s exciting to … here on our website . See below for the full list of 2024 CSP Annual Call awardees. …
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Ben Bowen
… high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, and … in spectral alignment, molecular networking, chemoinformatics, and bioinformatics facilitates impactful scientific … Leadership and Development Program Awardee 2005-2009: NIH K25 Mentored Career Development awardee 1998-2003: …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… a specific microbial host to replicate. Sequencing genetic material directly from samples sidesteps these challenges, … from different ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 computationally …
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Scaling Up Existing Skill Sets
… UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from … to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their experiences below. Name: … Biophysics program. (Graduated from UC Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial …
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Making a Lichen Together
… partnership is more commonplace — though perhaps no less dramatic. In lichen, the photosynthetic partner, either a … This work was supported by an intramural seed grant (IGSP 2008001) to DA, FL, and FD from the Duke Institute of Genomic … DA, FL, and FD (for bioinformatics) from a DOE grant No 112442 to Pacific Northwest National Laboratory; and by a …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… Moreover, follow-up meetings, agreements on exchange of materials and samples as well as research visits are … at the University of Duisburg-Essen in Germany in 2024 and 2025.  Participants from the UDE were Alexander … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… interest.” The combination of field data and genetic information has allowed the research team to associate climate adaptations with switchgrass biology, information that … southern locales did not survive the cold winter of 2019 at the most northern common garden in South Dakota. …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… are microscopic, photosynthetic algae. But human-induced climate change , a new study suggests, is displacing these … cool intermediate to the ocean’s extremes of about 28° and 97° Fahrenheit. “The study authors point to this fundamental … of Oceanography, who was not affiliated with the study. Climate change is in fact gravely affecting the sea ice and …
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JGI@25: Solving the Mystery of the Missing Oil
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  Kjiersten Fagnan touted the long-standing … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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Pinning Down a Piece of Photosynthesis
… list of genes, termed  The GreenCut2 Resource . It details 597 genes coding for proteins that are unique to … work well in further experiments, so she could glean information about their specific function, filling in our … a similar region —  a domain of unknown function, DUF2470. In the world of proteins, a domain of unknown function …
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Expanding Virophage Diversity
… packaging, and PRO, a cysteine protease involved in capsid maturation. Recently reported in  Microbiome , researchers … them without previously known representatives). Of these, 89 contigs were considered to be complete genomes, and their … the possible virophage genome size range from 13.8-29.3 kilobases (Kb) to 10.9-42.3 Kb. Additionally, the gene …
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