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Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D … running 1000s of metabolite standards, and development of high-throughput untargeted analysis pipelines.  Beyond …

… on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up genomics analysis to … MetaBAT , an automatic metagenome binning software … Education … Selected Publications … Software …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … and as a feedstock for biomass-based biofuel production. As seen with many commonly cultivated commercial … use this unique opportunity to quantify how transitions to higher ploidy could be generating these observed patterns. …

… up the toxic chemicals is commonly known as Enhanced Reductive Dechlorination (ERD.) It is dependent on the presence … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze the resulting …

… major food crops and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genome data from newly sequenced genomes, they also built a high-quality phylogenetic tree for  Dothideomycetes . The …