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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric … She also develops novel flow cytometry protocols for targeted recovery of specific microbes. …
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FICUS Overview
… free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides customized analysis, the JGI also participates …
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Computationally Classifying Fungal Lifestyles
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved … of the 1000 Fungal Genomes Project supported by the JGI Community Sequencing Project # 662 . …
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How Maize Makes An Antibiotic Cocktail
… corn variety and protect maize by fending off fungal and microbial infections. Scientists had assumed that maize … as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. … (JGI), a DOE Office of Science User Facility, through its  Community Science Program . And the work is part of a  …
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Cataloging the Microbes that Manage the Health of River Systems
… a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … access points to the information. The team harnessed a community-science program to collect samples from across the … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University …
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Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics
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The BioMart community portal: an innovative alternative to large, centralized data repositories
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A bacterial pioneer produces cellulase complexes that persist through community succession
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Soil pH influences the structure of virus communities at local and global scales
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Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens
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Diurnal cycling of rhizosphere bacterial communities is associated with shifts in carbon metabolism
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Prokaryotic community profiles at different operational stages of a Greek solar saltern
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