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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … accurate assembly of regions in the 2025 reference genome. Early comparative analyses have given the researchers …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora … . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall degrading …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of actinobacteria … Collaboratory, currently in beta form as the group seeks early feedback. The SMC web platform and associated … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … genome discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant … improved computational efficiency of its modeling in the early testing stages. By aiding the understanding of …
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Arboriscoccus pini gen. nov., sp. nov., an endophyte from a pine tree of the class Alphaproteobacteria, emended description of Geminicoccus roseus, and proposal of Geminicoccaceae fam. nov.
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the development and application of advanced mass spectrometry approaches and model …
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Simple and Rapid Site-Specific Integration of Multiple Heterologous DNAs into the Escherichia coli Chromosome
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Validation of two ribosomal RNA removal methods for microbial metatranscriptomics
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Expansion of the global RNA virome reveals diverse clades of bacteriophages
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of … project. These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane … more.  Microbes excel at recycling the abundant miscellanea of their surroundings. Case in point: for us, the smell of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal … role in soil carbon storage. Summary There are three types of fungal saprotrophs in the forest. White rot can break … The project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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