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Statement on the Use of Genomics Data
… of genomics through open access to resources and promoting data sharing to accelerate discovery and maximize the benefit to society. Inspired … and reinforced by the  Fort Lauderdale Agreement (2003), the JGI recognized the need to engage the community to … of basic research in the physical sciences in the United States, and is working to address some of the most pressing …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only accessible … portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, … of basic research in the physical sciences in the United States, and is working to address some of the most pressing …
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Promoting the Power of Viral Metagenomics
… published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early 2020, people … the world have been forced to confront the awesome power that viruses have to affect nearly every aspect of our daily …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… The practices that support agriculture – such as efficiently using dwindling water resources and restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy security for a … of basic research in the physical sciences in the United States, and is working to address some of the most pressing …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory (Berkeley Lab), the National Energy Research … Project. The award recognized the release of MetaHipMer, an end-to-end genome assembler that supports “an … of basic research in the physical sciences in the United States, and is working to address some of the most pressing …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace injuries and illnesses.  PPE or … Equipment is worn to minimize exposure to hazards that can cause workplace injuries and illnesses. These … of basic research in the physical sciences in the United States, and is working to address some of the most pressing …
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DAP-seq Drives Robust Mapping of Gene Regulation
… yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like … types, shedding light on the molecular basis of plant development and adaptation. “You learn a lot more than you would … have propelled the creation of a vast resource: nearly 3,000 genome-wide binding maps for 360 transcription factors …
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Supporting Global Research into Actinomycetes
… holds the key to discovering new antiviral medicines and treatments for infectious disease. Streptomycetes are also … and therefore a cornerstone of ActinoBase,  a public platform built on the knowledge of researchers studying … are of particular interest due to their complex developmental life cycles and diverse specialized metabolism. ( …
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JGI announces first round of 2023 New Investigator awardees
… share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects … previously-accepted proposals —  through the  New Investigator call under our Community Science Program.  Below find a list of the first 10 researchers accepted for 2023. Proposals are accepted year-round; the next review will …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… This year’s list features 6,900 researchers working in 21 fields.  Congratulations to the  2022 Highly Cited Researchers from the JGI … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed … of basic research in the physical sciences in the United States, and is working to address some of the most pressing …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene … Using this massive dataset, Nayfach clustered the MAGs into 18,000 candidate species groups, 70% of which were novel … BGCs in IMG/ABC (Atlas of Biosynthetic Gene Clusters) by 31%. ( Listen to this JGI Natural Prodcast episode on genome …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and … as part of the 2021 Laboratory Directed Research and Development (LDRD) program. Cole also received a DOE  Early Career … Cole and their team found over 1,000 upregulated genes, 188 of which were shared with previous studies in the same …
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