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Evolution of a Fungal Gene Expression Regulator
… genomes, but is not well understood in fungi. A team of researchers reported on the largest analysis of 5mC … the role of transposons and 5mC in fungi could help researchers find ways to protect poplar and other crops … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like …
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A Mentor’s Perspective on Training the Next Generation
… Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and … they’ve all mentioned how invaluable their time at the JGI was and how great it was to have an experienced career …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… Three stories of JGI-supported research, connected to nutrient cycles. … Xiao Ma. And Karen Serrano and Benjamin Cole explain their research on the symbiotic relationship between mycorrhizal …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American Academy of Microbiology (AAM). She has led JGI’s Microbial Genomics Program since 2009 and heads the … Lab’s 2015 Women @ the Lab honorees. Woyke is the second JGI scientist to receive the van Niel Prize; the 2011-2014 …
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Refining the Process of Identifying Algae Biotechnology Candidates
… often by starting with identifying the right ingredients. Researchers collaborating across multiple institutions have … gasoline gallons if target yields could be achieved. Researchers at many national laboratories are working toward … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… discussions, workshops, and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can …
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Mike Sneddon
… and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… range. But at what cost?  A collaborative team led by researchers at the University of Texas (UT) at Austin, the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … shifts. (C4 plants use a more efficient form of photosynthesis that reduces water loss, compared to the process used …
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric …
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Jasmyn Pangilinan
… reliability, thereby accelerating critical insights for the JGI User community. …
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Effects of Polar Light Cycle on Microbial Food Web
… environment. This cycle suggests a reliance on photosynthesis to maintain nutrient cycling that evolved separately … roughly 5-7,000 years ago and has been well-studied by many researchers for nearly five decades. In these frigid … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …
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Supercharging SIP in the Fungal Hyphosphere
… novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a … Applying this method to the study of a particular fungi, researchers identified novel interactions between bacteria … HT-SIP is a capability available to request through  the JGI proposal calls . …
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