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Picking Up Threads of Cotton Genomics
Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled … extremely pleased with Jeremy, Jane and their team. Many groups assemble genomes, but very few do it so well that it … Agricultural University (China), Texas A&M University System, U.S. Department of Agriculture-Agricultural Research …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… a number of notable achievements that showcase our collaborations and capabilities to enable great science that … challenges. In 2009, researchers at the JGI and the Bigelow Laboratory for Ocean Sciences described a novel technique to … the green sharpshooter Draeculacephala minerva bacteriome, pictured at the bottom.  Perhaps most notably, JGI’s …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “This represents the largest … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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NeLLi — Symposium on New Lineages of Life
Institute for Sea Research (NIOZ) Nicole Poulton , Bigelow Laboratory of Ocean Sciences Roland Hatzenpichler , Montana … Project Coordination Rekha Seshadri,  Functional Annotation Group Natalia Ivanova, Functional Annotation Lead Juan Villada, New Lineages of Life Group External Organizers: Jen Biddle, University of …
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Streamlining Regulon Identification in Bacteria
… factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Transcription factors control when and how genes are …
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Fishing for Novel Cellulose Degraders
Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Using a single-cell screen, they … learn more about what microbes are present in any given ecosystem—particularly those that are in low abundances—and … caught several microbes from known cellulose-degrading groups, the researchers also hooked and were able to …
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Complete Genome Sequence of Phormidium yuhuli AB48, Isolated from an Industrial Photobioreactor Environment
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High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk
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Jane Grimwood Named HudsonAlpha Genomics Chair
Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to rapidly growing … Sequencing Center. Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after the JGI was …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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The survivor strain: isolation and characterization of Phormidium yuhuli AB48, a filamentous phototactic cyanobacterium with biotechnological potential
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Applying Viral Genomics Expertise to Understanding the Human Virome
Science user facility located at Lawrence Berkeley National Laboratory, have collaborated with global researchers on …  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The Program aims to better understand the viruses … viral genomes. This includes (i) classifying viruses into groups that can be compared across studies, (ii) predicting …
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