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Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … focused on stable and accurate computational methods for reacting subsurface flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the …

… the lead of the User Support Analysis group. The group performs custom analysis and develops automated pipelines for analysis of resequencing, transcriptome, epigenome and … 85(18):e01210-19 Price et al 2018. Mutant phenotypes for thousands of bacterial genes of unknown function. Nature …

… the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and … author). A high-resolution enhancer atlas of the developing telencephalon. Cell 152, 895-908. Gross SM, … Woyke T, Wang Z, Rubin EM (2011). Metagenomic discovery of biomass-degrading genes and genomes from cow rumen . Science …

… at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project out to the future of the … with Ari Patrinos. The Genomics Arms Race Ari Patrinos , Former Director of DOE’s Office of Biological and … many more years of enabling clean energy and renewable production — and congratulated JGI on the anniversary. “This …

Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the …

Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one …

… & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able to … plant rhizosphere, wastewater, and even animal and human (for the first time) gut and taxonomically classified into 27 …

… help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms that SAR324 and other microbes use could inform scientists’ understanding of carbon fluxes in the … Ocean Processes and Ecology and the Daniel K. Inouye Center for Microbial Oceanography: Research and Education. … SAR324 …

… the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … bioproducts. Summary Researchers at the University of California, Davis and UC Santa Barbara generated a list of … They then used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on …

… language processing techniques to categorize genetic information. Learn more about their work here in a series of … virtual events and technology enabled a fruitful experience for mentors and students alike. Tools like Slack, Google … career in genomics, and to help foster a diverse future workforce in science. Since the program’s inception, more than …

… the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his … as a computational biologist. My primary future goal is to form a startup.” …