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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … confirmation bias, because it enables scientists to study how methanogenesis takes place in the context of the … They could just be switched off.” Yet, after extensive study, Hatzenpicher and his team were able to definitively …
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Frederik Schulz
… the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics … and phylogenomics) and machine learning to find novel functions that may impact microbiome structure and biogeochemical …
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Help from Citrus’ Bitter, Hardier Cousin
… never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  … JGI collaborator, are senior authors of the  recent study published in  The Plant Journal.  this study included the discovery of candidate genes that confer …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Program was brimming with excitement and determination as they came onsite. From data carpentry to science … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant … able to talk to people that are working at the lab, my coworkers and I also wanted to know what it’s like to work …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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User Advisory Committees
… Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace and seek to establish … our stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts … enzyme variants. ECR enzymes are capable of fixing CO2 many times faster than RuBisCo, the most common CO-2 fixing … can be further explored for novel functions. In the current study, the team combined the CETCH cycle with a …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Congratulations to Jennifer Doudna of …
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New and Improved: Eucalyptus Reference is Now Accessible
… assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … inherited from each parent. It also has 700-fold greater contiguity, meaning the genome is reconstructed in much …
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DAP-seq Drives Robust Mapping of Gene Regulation
… assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated … preferences are very, very stable over long evolutionary times. But, there’s a lot of action happening in terms of … hard to make them work for the kinds of plant samples we study — and even go beyond, putting four different species …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers … gaseous organic sulfur compounds in the atmosphere.  Beyond bacteria, this enzymatic machinery has potential as an … innovation ecosystem. “At JGI, we’ve done the synthesis, metagenome mining, all the way from sequencing to functional …
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