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Danielle Goudeau
… single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, cell sorting, genome …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida … peer through the waters and clouds of insects hover just above. Described as a “river of grass” that stretches … final paper that  could be published. Watching 18 students working to create a paper simultaneously in the same …
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New Research Sheds Light on Diversity in the Deep Sea
… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too … new biotechnologies around clean energy,  biofuels and bioproducts.  Summary Hydrothermal vents are typically found … seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an extremely hot, …
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JGIota: Sequencing Shiitakes with David Hibbett
… David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, he and 39 collaborators published a paper tracing how these mushrooms have evolved.  …
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Frigoriflavimonas asaccharolytica gen. nov., sp. nov., a novel psychrophilic esterase and protease producing bacterium isolated from Antarctica
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Ben Bowen
… in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for … T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and metabolite atlases. …
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Nick Everson
… Lab Automation, and Administration departments. He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial … Systems & Engineering Division. Prior to his tenure with Berkeley Lab, he served in the US Navy for 6 years as a … national laboratories, and other organizations with regard to JGI administrative and financial management, …
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which … and more. And eventually, their findings could help us grow better crops, with less impact on our planet. …
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Taking Stock of the Known and Unknown Microbial Space
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out … Corresponding author Ivanova said that the JGI continues to work along the lines of increasing genomic representation of …
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PhycoCosm Tutorial
… tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …
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SPRUCE-ing Up Science
… Oak Ridge, Tennessee. Recently, Lawrence, in collaboration with researchers from ORNL, Lawrence Berkeley National … related to how bacteria that colonize the roots of sphagnum work to transfer their thermotolerance abilities. This … on his PhD program at UC Merced in 2013, this field was just beginning to develop and expand into the world of …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… , employ the evolutionary strategy we are far more familiar with: differentiating into male and female sexes. For the … in mammals: a structure that helps correct deleterious mutations. The Impact Shrub willow and its close … for females. To better understand how sex determination works in shrub willow, researchers investigated the …
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