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… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. Having this first genome sequence of a …

… data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … are based upon? A: This is still work in progress as new genomes are being added. We do plan to publish the tree or … Q(uestion): Can you please explain again how did you pick genomes to be on the genomes portal? For the taxa I work on, …

… techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress … the evolutionary and practical significance of plant pan-genomes including understanding polyploid genome evolution in a pan-genomic context. … manipulation in the laboratory because of its compact genome, diploid nature, self compatibility, rapid generation …

… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … Database has matured from six projects on a spreadsheet into a flagship  genomic metadata repository, making curated … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …

… the JGI’s  resources, these researchers will dive into a range of projects spanning the resilience of desert grasslands to the metabolic … floor and along ocean shores. Their results could bring key insights into how our planet’s nutrient cycles are …

… in the future, the evolutionary past may hold key insights. The way that plants process nutrients has a rich … proteins, as well as recycling nitrogen. Now, with insight into a specific enzyme class that’s important to the way … eukaryotes having slightly larger numbers due to their expanded metabolisms. These ATs can operate in a relatively …

… to remove lignin and transform the remaining components into  biofuels and bioproducts. If anaerobic fungi could be … out how to create enzymes that break these components down into glucose. It’s that third component, lignin, that has … with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … and evolution of  Dothideomycetes could provide more insights into how these fungi have adapted to stress and host … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …

… with this purification step, and Baumgart continued and expanded on the work known as biotin DAP-seq after she left … between genomes of different species. This can provide insights into how they orchestrate sets of genes to execute similar … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… data (secondary metabolomics), how can we map it into these networks? A: We use networks based on the … any training opportunities for those of us looking to get into metabolomic analyses? A:  Not currently, but this is … Jenny Mortimer’s presentation):  You used 4 replicates for transcriptome analysis and 8 replicates for metabolomics. …

… and the structure and extent of the Antarctic microbial pan-genome. Since these microbes thrive under extreme … salinity conditions, understanding their adaptations offers insights into microbial evolution, as well as how Antarctic microbial … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …