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Metabolic profiling of two white-rot fungi during 4-hydroxybenzoate conversion reveals biotechnologically relevant biosynthetic pathways
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater
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Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly … addition to the synthetic biologist’s toolkit: a technique for  c hassis (or strain)-independent  r ecombinase- a … can be used to create compounds more efficiently than one strain could on its own.  In work published in  …
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Nikos Kyrpides
Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters … ecosystems, INRA, France; A Knowledge-Based Bioinformatics Framework for Microbial Pathway Genomics (MICROME); …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation … CETCH cycle with a microfluidics platform that mimics the metabolically active microcompartments where photosynthesis …
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DOE Metrics
…     2,140     Q4 2025 175     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … or plant genomes. [Download PDF] End-of-year Goal – Develop one new computationally enabled approach to analyze complex …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA … the Integrative Genomics Building—the new home of the JGI and KBase in the heart of the Lab’s 200-acre campus—with the …
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry
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Training the Next Generation of Talent
… (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to start orientation as a first-year graduate … cancer research. Lawrence’s project had him developing a framework that would allow users to simultaneously run …
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