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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms … interactions. This work,  recently published in  The ISME Journal , by contrast, relied on methods that eschew … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Promoting the Power of Viral Metagenomics
… and  Nikos Kyrpides , was  recently published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a … power that viruses have to affect nearly every aspect of our daily lives.  But for researchers who study viruses that …
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Tracking the Origins of Methane-Producing Microbes
… published in the Proceedings of the National Academy of Sciences , researchers at Stanford University, the Chan … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the discovery of a novel … These two things combined led us to conclude that our new methanogen did not belong to the Euryarchaeota, the …
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A User-Centered Approach to Accessing JGI Data
… and NMDC? A: We have reached out to KBase regarding use of our search API. They have expressed an interest in using … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Annual Meeting 2027
… this page as further details become available. Sign up for our newsletter to receive updates.    …
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2022 Progress Report
… Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National … (Berkeley Lab), is to become the leading integrative genome science user facility enabling researchers to solve the …
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Game On: High School Students Drive Everglades Metagenomics Study
… class at Florida’s Boca Raton Community High School. The course had a defined set of objectives, and started with an … Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it … sequenced from the metagenomic soil samples from the four sites tested.  They found Euryarchaeota to be the most …
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Styling for Safety: PPE, It’s the JGI Way
… address this issue, we launched a PPE Campaign to provide our colleagues with a visual representation of JGI PPE … is important that we follow these requirements and remind our colleagues to do the same. Check out our JGI trendsetters below to see examples of appropriate …
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Crysten Blaby-Haas
… engineering. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with … (2015) where she co-founded and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area (SFA).  … PhD, Microbiology and Cell Science, University of Florida NIH Postdoctoral Researcher, …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… into a written report that is published in a scientific journal is the ultimate achievement. To get to this point … and it feels so rewarding,” Wint said. For Axel Visel, JGI Science Deputy and a co-founder of the internship program, … this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley National … in developing and managing public viral genomics resources such as analytical tools and data repositories to two … of metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for identifying mobile …
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Accelerating Metagenomics Discoveries with Deep Learning
… recognition: for example, a camera’s ability to recognize your face and distinguish it from your friend’s. Biologists aim to capitalize on these kinds of … in proteins that low sequence identity may belie. The technology he’s using is magical; transform any length of …
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