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… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational …

… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed with two main objectives. First …

… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … grew well; the survivors had their DNA sequenced at the JGI as part of a 2014 Community Science Program project. The …

… metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … was performed by Danielle Goudeau and Rex Malmstrom of the JGI’s Microscale Applications group . Cells were randomly …

… Harnessing BER-funded data resources, researchers built an interactive and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metabolism from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the …

… plant for energy: Cellulose, hemicellulose and lignin, cumulatively called lignocellulose, are the primary components of … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also conducted RNA sequencing and alignment to the …

… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … virus sequences vary widely. In a previous effort, an international consortium recommended specific guidelines and … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced …

… in early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … into the evolution of life on Earth. For decades, longtime JGI collaborator Bill Inskeep of Montana State University … (gene expression), and direct microscopy. Through the JGI’s Community Science Program , the team used metagenome …

… A genetic architecture that is characteristic of the sex chromosomes of mammals is, … at West Virginia University (WVU), led the study’s international team, which included scientists from Oak Ridge … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) participants. One … in alpine and high latitude ecosystems, deciphering their internal molecular mechanisms can help researchers better … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …

… Maize produces a family of compounds that protects it against infections — using surprisingly few … as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  …

… Research uncovers the genetic foundations that helped plants conquer land over 600 million … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … . Published  May 2024 in  Nature Genetics by an international research consortium led by the University of …