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Ben Bowen
Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support … the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum …
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JGI Announces 2023 Community Science Program Awardees
Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility … had five areas of emphasis: genes to function, plant and algal functional genomics, inter-organismal interactions, …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was … purpose of this CSP is to better understand methane cycling in mangrove wetlands in south Texas,” he explained. “In …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The … protect these vital ecosystems. Peat bogs have two distinct zones: Hummocks and hollows flow like hills and valleys, on … By sequencing the genome, researchers were able to pinpoint specific U/V chromosomes (‘U’ for female and ‘V’ for …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea … researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst lab used to search …
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MGM Workshop at Fisabio Summer School 2025
… research, the health sciences and related fields who are interested in learning and sharing concepts, tools and research results … the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia Ivanova and Rekha …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth … Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Transcript for Audio   ALISON:  …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an internship program to bring students to the JGI for research …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have … of other organisms. As they infect microbes like bacteria, algae and protists, all kinds of viruses impact many … access to these viral genomes. The new database was called IMG/VR. It featured samples from different ecosystems all …
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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of Energy (DOE) … Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program lead Igor Grigoriev took readers on a quick …
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Nigel Mouncey
Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its … Nat Rev Microbiol. 18:313-314 Palaniappan K et al. 2020. IMG-ABC v.5.0: an update to the IMG/Atlas of Biosynthetic …
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