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… on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up genomics analysis to … MetaBAT , an automatic metagenome binning software … Education … Selected Publications … Software …

Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … sequence data) can suggest different predatory behaviors. A high relative abundance of virus can suggest a so-called … they’d likely have a hard time finding more. … The work conducted by the U.S. Department of Energy Joint Genome …

P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas … that live there.  A  Communications Biology article highlights how one microalga collected from water on the ice … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … From 2011 – 2015, she worked with Sabeeha Merchant at UCLA as a NIH Ruth L. Kirschstein National Research Service …

Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D … running 1000s of metabolite standards, and development of high-throughput untargeted analysis pipelines.  Beyond …

… evolution and rapid changes in both genome content and structure following a genome duplication event that occured … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Community Science Program. The OGG has set out to generate high-quality genome assemblies and annotations for 35 …

… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …

Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …