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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write … (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone Health) and … yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his … of transcription factor binding sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is … BS in Biochemistry and Cell Biology, University of California, …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was preceded by … one JGI mentor. Together, they work through a specific project that aligns with each intern’s interests or … in some cases daily, check-ins with their mentors to ensure projects progressed despite the challenges of remote work. …
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Gotta Catch 'Em Gall
… Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So … In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes … The Science A team led by researchers at the Max Planck Institute (MPI) for Marine Microbiology has developed, … be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …
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JGI & KBase at PAG XXVII
… XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … science opportunities. Learn how to apply for a project with the JGI Community Science Program, and how you …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational … After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued to … AB in Physics, Princeton University, NJ MS in Theoretical Physics, Cornell …
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VEGA Symposium
… – $250 Students & Postdocs – $200 Regular Rates (begin September 19, 2026) General & Berkeley Lab Attendee – $300 Students & Postdocs – $250   Hosted by the DOE Joint Genome Institute, the 5th Viral EcoGenomics and Applications (VEGA) … of virus-host interactions and phage-based technologies for microbiome manipulation, the VEGA symposium represents a …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have … source of both protein and oil was also the largest plant project completed by the JGI. It has since been cited more than 5,400 times, including a number of … Glycine max on Phytozome …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. …
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A User-Centered Approach to Accessing JGI Data
… common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural … limited to: Public data: datasets associated with completed projects that are eligible for public release, have … For IMG & Mycocosm: Data that is associated with an ITS project ID (AP or SP) Q: What JGI Data Policy considerations …
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