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Extensive Rearrangements in the Chloroplast Genome of Trachelium caeruleum Are Associated with Repeats and tRNA Genes
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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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Protocols
… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction …
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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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Comparative genomics reveals a dynamic genome evolution in the ectomycorrhizal milk‐cap (Lactarius) mushrooms
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Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi
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A Plant Root Atlas for Tracking Developmental Trajectories
… , a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … 6th? All URLs with a domain of  https://phytozome.jgi.doe.gov will be forwarded ( where possible ) to their …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head.  Dr. Fagnan is also … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about …
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User Executive Committee
… The UEC represents the JGI user community and is responsible for providing input … on JGI policies and practices that affect users and their science including technical capabilities offered, proposal … community, and promotes communication and collaboration within the user community. …
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Do Genetic Drift and Gene Flow Affect the Geographic Distribution of Female Plants in Gynodioecious Lobelia siphilitica?
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel teamed with University of … the event and shared updates. Here are a few of the highlights: Mario Banuelos (2017 graduate intern): Assistant …
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