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… in professional development enrichment activities. For some students in the 2021 cohort, this was their first … P. hallii Mutant Library … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional … … Cataloging Lineage Specific Conserved Genes in Giant Viruses … Pan-genome Graphs: Approaches for Complete …

… other oceans. That zinc turns out to be extremely important for polar phytoplankton.  After peering into the function … at the University of East Anglia, leads this effort to understand what makes polar photosynthesizers tick. … his team then linked those species-level observations with data on microalgal communities across different ocean …

The PhycoCosm data portal allows anyone to freely investigate the genes of … Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, including the Integrated …

For many scientists, the culmination of their work into a … ecosystem,” said Salamov, one of Wint’s mentors and a data scientist at the JGI. Previous studies were conducted … predictor of gene expression levels using machine learning tools. “This was very exciting to see how Rhondene not only …

… , Sebastien Duplessis of the French National Institute for Agricultural Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop better strategies to counter … . … Phakopsora pachyrhizi on MycoCosm Data Portal …

… ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and … genes involved in agronomic traits related to nutritional quality and disease resistance  due to the sequence’s … and that’s going really well. And having the sequence data available for us to enable that research will have a …

Data from marine heatwave event may foreshadow climate … it in the deep ocean. With genomic samples collected before, during and after The Blob, researchers developed a … in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow in the …

… to advance foundational science, creating opportunities for the global research community. The U.S. Department of … a vast range of organisms and ecosystems. These kinds of data could open opportunities along multiple avenues, … expect to offer our user community an exciting range of new tools and capabilities to support their scientific …

… months, the students participated in networking workshops, data carpentry hackathons, and also made new friends while … experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, … ” Anna Kucherova : “I got to learn about skills and tools that I’d never done before from my mentors. Also, …

… nearly 100,000 single root cells and combining the information with previously published datasets. The work was  recently published in the journal  … Relevant Links: Single-Cell Data Viewer Tool on Phytozome Biosciences News:  Plant Single-Cell …

… of Plant and Microbial Biology at University of California, Berkeley. He contributed to the Human Genome Project … et al (2023) Lignin deconstruction by anaerobic fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) … Riley et al (2016) Comparative genomics of biotechnologically important yeasts.  Proc Natl Acad Sci U S …

… the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … and Liability Act (CERCLA) was enacted by Congress in 1980 for Superfund sites which are hazardous waste areas that … , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI …