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Busting the Unbreakable Lignin
… of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a plant … through the lignin.  Researchers led by Michelle O’Malley’s lab at the University of California at Santa Barbara  … The authors acknowledge their funding sources: Office of Biological and Environmental Research …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes … The Science A team led by researchers at the Max Planck Institute (MPI) for Marine Microbiology has developed, … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) to develop a process for more …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is … can carry out. The work on single cells was done in collaboration with scientists Tanja Woyke and Rex Malmstrom at … (above 200 m, or 656 ft), and have genes to support a photoheterotrophic lifestyle. In other words, they snack on …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, researchers have identified a protein in … the FICUS program to JEM and used resources at the DOE Joint Genome Institute (JGI) and the Environmental Molecular …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … too costly for them. The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help … Science User Facility located at Lawrence Berkeley National Laboratory. More recently, O’Malley’s team has begun to …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial chemical … most of these gene clusters remain silent under standard laboratory conditions. Researchers with the Department of … This work conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community … researchers led by David Weston of Oak Ridge National Laboratory make the case for  sphagnum as “an unparalleled … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI … as PI? A(nswer: The FICUS program is open to scientists at international institutes.  Applicants do not need to be US …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. … . The work builds off a proposal approved through a collaborative science initiative called Facilities Integrating …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that … Genome Inside: THE Bioenergy Tree …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that … Filling in the Plant Tree of Life … Genome Insider …
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