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A Complex Confection Decoded: Sugarcane Reference Genome
… the location of genes that provide resistance to the brown rust disease that can devastate a crop. The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … for the sugarcane cultivar R570 has been generated and  reported in the journal  Nature . The work led by …
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating Collaborations for User Facilities (FICUS) program for fiscal year 2026, in … what each facility could generate individually. Learn more about the projects below. …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State University campuses for …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research … Myco-Ed aims to integrate real scientific contributions/discoveries into undergraduate teaching laboratories with … DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
… in hot springs. Hear how their recent work revealed more about the history of the Chloroflexota phylum and a new way …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this annual gathering of leaders from diverse …
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From Textbook to Real World Applications
… La Salle High School expressed an interest in learning more about the principles of synthetic biology, Robert Evans and …
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Improving the Cacao Genome and Phytozome
… Cocoa Organization (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global … for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . … annotation was developing a high quality node for cacao used for systemic orthology to enable use for both cacao …
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Microbial Genomics & Metagenomics (MGM) Workshop
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics …   This highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes … wealth of public microbiome sequence data and enables the user to analyze these data with existing bioinformatic …
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DAS Tool for Genome Reconstruction from Metagenomes
… genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … of California, Berkeley and involving JGI researchers, reported on the development and validation of a …
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Chomping Toward Better Plastic Recycling
… We know all kinds of things about plastic – except, how to break it down for recycling. …
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Effects of Polar Light Cycle on Microbial Food Web
… scant, Ace Lake’s bacteria instead go through a boom and bust cycle aligned with light availability. A long-running … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … Science Program. For most months each year, Ace Lake is covered in thick ice, with a combination of marine and …
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