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… than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from mutually beneficial to … the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like …

… genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … functions in processes ranging from nutrient cycling to plant health and growth. Developing a scalable computational … The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in …

… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Research (BER) and is a contribution of the Scientific Focus Area “Phenotypic response of the soil microbiome to …

… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for … and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. … and evolutionary biology. Dr. Rokhsar’s research is focused on understanding the origin, evolution, and diversity …

… work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in environments … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … simultaneously, these genomic studies provide information about virus hosts. As a result, the outcomes of these …

… workshop, Volkan Sevim, a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … that low sequence identity may belie. The technology he’s using is magical; transform any length of amino acid …

… Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the next … of the National Academy of Sciences . The team focused on the dominant bacterial clades shared between honey … pollen’s pectin and hemicellulose are degraded mainly by just two clades:  Gilliamella,  which mostly resides in the …

… DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available datasets encompassing a … analysis.  MycoCosm provides data and tools via a graphical user interface, ensuring that no programming knowledge or …