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… After studying the mechanism of action of antifungal natural products and their derivatives during … which she deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position … is the Microbial Science Program Head as well as our Deputy of User Programs. Click to learn more about the program's …

… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership … at Berkeley Lab. She is spearheading the development of a joint user capability between the JGI and Molecular … of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in …

… JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome … Earth aims to crowdsource antimicrobial discovery for the control of plant pathogens, partnering with 600 instructors …

… Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of different plant species will help us get there. …

… insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … into multiple interconnected layers. The architecture of these algorithms, inspired by communication networks … that low sequence identity may belie. The technology he’s using is magical; transform any length of amino acid …

… directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued to develop … Publications … Selected Publications …

… Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at NERSC, IMBA (Institute of Molecular Biotechnology, Vienna) and the High Field MRI … of the Cluster Advisory Group (CAG), he sees his role as using the substrate provided by LBNL, where possible, and …

… and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a … The Impact The initial analysis highlights abundances of gene annotations that provide insights into the nutrients …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … Her lab has sequenced four additional green algal genomes using Chlamy as a reference for functional annotation, …

… a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … both haplotypes, meaning it separately represents the sets of chromosomes inherited from each parent. It also has … to provide an improved eucalyptus genome assembly generated using advanced technologies to reconstruct the complete …

… BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab … T., Ruebel, O., Northen, T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot … laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and characterizing …