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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … ecological roles of microeukaryotes in terrestrial ecosystems. Additionally, Dr. Schulz is leading a DTRA-funded …
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Alabama A&M Interns Access An Abundance of Knowledge
… In 2024, the DOE Joint Genome Institute and Alabama A&M … mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … LaMonika Dent : I hope to gain hands-on experience in molecular biology and plant functional genomics, because …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since identified  …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental … and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to … with ratios of DNA sequence fragments from the ecosystems. Selecting a protein identified from their studied …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy … Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … methods for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … but it also requires a deep understanding of biological systems. The JGI strategic plan lays out how users and the … partnerships, and help cultivate new user communities. Biomolecular materials initiative. Pairing the JGI’s genomic …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … mass spectrometry approaches and model laboratory ecosystems (EcoFABs). …
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Three Join the JGI User Executive Committee
… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … of the University of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go … on the UEC. As a user of the JGI and the Environmental Molecular Sciences Laboratory, another DOE user facility, …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi … The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial relationships with …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … Data Standards and Reproducible Workflows To Advance Earth System Science” 11:18am Convention Center, Rm 238-239: Kaela …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By analyzing the metagenomes, metatranscriptomes … #3777 (to EFD). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … in various industries, having genomic resources to develop molecular breeding tools has been critical. The new improved …
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