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Party in the Rhizosphere
Pett-Ridge of Lawrence Livermore National Laboratory has your backstage pass. …
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Learning to Look
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a … microbial genomes and 2,249 of the 6,412 (35 percent) metagenomes mined for this study. “We’re simply getting much … result of this hidden diversity of inoviruses now overhauls our perception of this virus group – from minor curiosities …
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Simon Roux
Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France Ph.D. in … with long standing virus-host interactions. The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses … Giant virus diversity and host interactions through global metagenomics. Nature 578, 432–436. … DOE BER Early Career …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put …
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Decoding Yellowstone’s Microbial Mats
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are … such as heat waves, droughts and floods. The planet’s resources are being stretched by a growing human population and … of California (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture P­­lant Gene …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley National … in developing and managing public viral genomics resources such as analytical tools and data repositories to two … (“contigs”) from thousands of ecologically diverse metagenomics samples. The work is supported by NIH Common …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … populations rely heavily on groundwater as their only source of clean drinking water. Over 90% of the PCE in the … and adjusting the environmental conditions to encourage their growth. In this instance, vegetable oil was …
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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program awards … mission areas across the 6 Office of Science research programs. Among the recipients of the latest SCGSR award is … are developing cutting edge technologies to answer our most pressing problems. I’m very much looking forward to …
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Corals in Hot Water Get Help From Their Microbes
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