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… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … concept test, the team reported that the algorithm was over 95% successful at classifying the fungal genomes Support … in correctly predicting plant pathogens (blue) vs saprobes (green). (From Haridas S et al.  Studies in Mycology , 2020.) …

… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress … with their microbiomes. In addition, his group conducts comparative genomic research to understand the evolutionary …

… elongata enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living off decaying organic matter, or … and without an inoculation of the  M. elongata strain PM193 added to a diluted soil mixture, publishing  the results … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… Large-scale comparative analysis leads to identification of biosynthetic … collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in these gaps of knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on …

… EcoFAB 2025 Conference is organized by the EcoFAB Steering Committee, dedicated to advancing standardized fabricated …

… Genomes from uncultivated bacteria offers clues to ancestral … to gain and harness energy. As reported January 28, 2019 in Nature Communications , two research teams joined forces and data … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… a consortium that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature Biotechnology.  … than 200 scientists and sequenced by the JGI through the  Community Science Program, and already available on the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… shrubby grass that can grow year-over-year on marginal soil and with few resources. Despite the low maintenance, it … crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model species. The following year saw the beginnings of common switchgrass gardens to track crop productivity across …

… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & … – that the JGI offers through proposal calls on a competitive, peer-reviewed basis to the worldwide scientific community can advance your research goals. Keynotes: M. …

… order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … funded through the National Institutes of Health’s (NIH)  Common Fund Human Virome Program .  Nikos Kyrpides , head of … The work is supported by NIH Common Fund grant 1U01DE034196-01. The JGI team, including Kyrpides, Camargo, and Roux, …

… cycles. Francis Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into …

… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … cycles. He provides his expertise to the JGI user community and supports various user projects in the … al. 2022. Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …