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Understanding Wildfire Recovery, Starting in Soil
… in Nature Microbiology , went a step further, using both DNA and messenger RNA (mRNA) sequencing to identify those … Leotiomycetes species and Coniochaeata lignaria , and both DNA and RNA viruses. One trait that stood out in both …
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JGI Announces 2023 Community Science Program Awardees
… five areas of emphasis: genes to function, plant and algal functional genomics, inter-organismal interactions, …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… catalyzed by microbial communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP … who process the modified compound will have heavier DNA or RNA, and SIP techniques leverage this to untangle … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Human Genome Project DOE Chromosome publications: The DNA sequence and biology of human chromosome 19 The DNA sequence and comparative analysis of human chromosome 5 …
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Novel Z-DNA binding domains in giant viruses.
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JGI on the 2021 Highly Cited Researchers List
… understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity toward … of microbial novelty to assigning metabolic and functional capabilities. Videos from symposium talks are …
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Learning to Look
… which are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not … key functions such as virion structure and extrusion, and DNA replication and integration. The researchers also … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… “ Advanced analytics for uncovering virus dynamics and functional potential ," is among the five focused on tool … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that are still vital to facilitate the assembly of small DNA fragments into larger and coherent pieces called contigs … switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion process.  …
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Hiroshi Otani
Otani, H., Lee, Y.E., Casabon, I., and Eltis, L.D. (2014) Characterization of p-hydroxycinnamate catabolism in a soil …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help … host cell and then get passively replicated with the host DNA, have long been considered to be more abundant in these …
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Accelerating Metagenomics Discoveries with Deep Learning
… deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole samples rather than … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …
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