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Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits
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Glacier-preserved Tibetan Plateau viral community probably linked to warm–cold climate variations
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Activity-targeted metaproteomics uncovers rare syntrophic bacteria central to anaerobic community metabolism
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace … during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & … their work. It’s fun to be around people who are generous with their time and like nerding out about the big stuff, …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … in activity as well; at any given time, many species in a community may be in ‘low power mode’, where they do very …
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The Power of One, Amplified
… For example, they showed that the composition of the community was similar across sequencing approaches, that … cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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A Complex Confection Decoded: Sugarcane Reference Genome
… Sugarcane was the last major crop without a reference quality genome and now crop researchers … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … Institute. The work was partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference …
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Mapping Heat Resistance in Yeasts
… for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … had their DNA sequenced at the JGI as part of a 2014 Community Science Program project. The results revealed that …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga … for developing ​​bio-based industrial products.    The Science Scientists have fully decoded the genome of an … of Energy (DOE) Biological and Environmental Research (BER) program to advance a fundamental understanding of genome …
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Digging into Microbial Ecosystems Deep Underground
… deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re … The video complements a recently published paper with first author Amundson in the journal Microbiome . The … work builds off a proposal approved through a collaborative science initiative called Facilities Integrating …
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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Enhanced nutrient uptake is sufficient to drive emergent cross-feeding between bacteria in a synthetic community
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