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Mike Sneddon
… and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific … a laboratory information management (LIMS) system. He previously led the NGS Software team and metagenomic data platform …
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Gotta Catch 'Em Gall
… called galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these weird little pods. …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… their schedules were filled with trainings that they later reported were incredibly valuable to their careers going forward. Watch this short video (below) to hear more about the summer from their own perspectives. The interns … JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and mentor Vy …
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User Support Analysis Group
… The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse …
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Alabama Agricultural & Mechanical University Internship Program
… success of the UC Merced internship program, they left the JGI more confident and ready to tackle real-world scientific … allowed them to:  Learn new skills. Experience industry-level work and coding. Receive mentorship, network and …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … by the JGI, scientists have begun the complex process of uncovering the hidden secrets of soil viruses. The Impact The …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE … fellow interns and scientists alike. Want to learn more about their experience? Watch the short video below. Video … fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna Watson: My mentor is Dr. Yi …
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Digging into Microbial Ecosystems Deep Underground
… in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of … Amundson at Colorado State University have many questions about the microbial communities deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re …
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Accelerating Metagenomics Discoveries with Deep Learning
… (Berkeley Lab) and other institutions shared their works-in-progress with 86 participants in an online workshop to … workshop, Volkan Sevim, a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of …
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an … of viruses, with six families. Additionally, the team uncovered a range of genetic diversity among inoviruses with …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … to address long-standing evolutionary ecological hypotheses about how C4 perennial grasses like switchgrass respond to …
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