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Type IV Pili‐Associated Secretion of a Biofilm Matrix Protein From Clostridium perfringens That Forms Intermolecular Isopeptide Bonds
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… enzyme family evolved across 90 species. “One unique thing about this work was our focus on all the kingdoms, including animals, plants, bacteria, … found that these enzymes have evolved distinctly from both core and specialized enzymes. Even during …
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A User-Centered Approach to Accessing JGI Data
… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … current Data Restriction Policy requires that users know about the FY Funding Year, and the publication status in … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Congratulations to the  2022 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … Simon Roux (Cross-field)  Jeremy Schmutz (Cross-field)  Susannah Tringe (Microbiology)  Tanja Woyke (Biology and …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … popularizer and communicator (and at one time, the spouse of Lynn Margulis). The information was then used to … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over … discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public databases and … introns and multiple genetic codes. Adding to the challenge, mitochondrial sequences are frequently embedded …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for … ,” as Kathy Yelick of the Computing Sciences Area at Lawrence Berkeley National Laboratory (Berkeley Lab) … users — have access to high-quality, assembled datasets from all of this information. The JGI aims to create …
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The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole
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Microbial drivers of methane emissions from unrestored industrial salt ponds
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Genome Sequences of 42 Bacteria Isolated from Sorghum bicolor Roots
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A unified catalog of 204,938 reference genomes from the human gut microbiome
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A comparative genomics study of 23 Aspergillus species from section Flavi
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