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… polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … To create this reference sequence, the team relied on bacterial artificial chromosomes (BACs), vectors that can hold large DNA segments such as an entire sugarcane gene and its …

… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …

… JGI researchers lend expertise to develop tools and data hub … viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for identifying mobile genetic elements ( Nature Biotechnology , 2024), and iPHoP , an integrated machine learning framework … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …

… Researchers at the JGI develop a tool to quickly and accurately identify mobile … identifies and classifies MGEs based upon their gene content and their genetic sequences. The software was … approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 …

… genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … developed and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to … samples. The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in …