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… use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 … The organisms on our planet encode these functions in their genomes, and the JGI is uniquely positioned to combine … of work led by an international consortium culminated in a reference for the complex  sugarcane genome sequence. The …

The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The … on the effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) activities and …

… scientific relevance and quality. The Committee does not perform management functions nor does it direct the Programs’ …

The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers … tested the approach on bacterial laboratory models to set a reference for its performance, and then applied it to … To validate the predicted cellulases from their captured genomes, the team then used DNA synthesis and cloning, …

UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has …

For the first time, a team has comprehensively described … instead of lysing them, which appears to be prevalent in marine environments, they were predicted to simply abide … virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the …

… has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the … DOE computational facilities (e.g., the National Energy Research Scientific Computing Center (NERSC) and data …

… sequencing, new sequencing technologies, and related informatics; overview of the scientific programs at the JGI; … from the DOE Office of Biological and Environmental Research (BER) program, set the final sequence allocation for this program. …

… to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project … the lead of the User Support Analysis group. The group performs custom analysis and develops automated pipelines for … epigenome and other functional genomics datasets generated by JGI user science projects. … BS in Biochemistry …

… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … not be possible with traditional approaches. … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in …

… involved? How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics … the metabolomics and transcriptomic data? A:  We use MAGI. Reference: Erbiligin et al.  MAGI: A Method for Metabolite … transcriptome analysis and 8 replicates for metabolomics. Why is this? A:  We did a pilot experiment with the JGI to …

New genomes highlight the diversity of white rot fungi in the … 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks … structures, as well as atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and …