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DAP-seq Drives Robust Mapping of Gene Regulation
… assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated … Implementation Lead at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … “switches” within multiple complex genomes. The end product is an expansive, multi-species dataset enabled by …
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All Events
… The JGI is represented at conferences year round; find out where …
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Year in Review: JGI’s 2018 Progress Report Available Now
… The latest edition of the JGI Progress Report highlights notable research and … better understand arsenic mobility and to better understand their roles in the global sulfur cycle. Copies are available …
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Meeting Report: “Metagenomics, Metadata and Meta-analysis” (M3) Workshop at the Pacific Symposium on Biocomputing 2010
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Cytochromes P450 involved in bacterial RiPP biosyntheses.
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Webinar: Introducing the BioSANS capability
… The BioSANS instrument is at the Center for Structural Molecular Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental … (BioSANS) instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, …
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A Sorghum Pangenome Opens More Doors to Discovery
… holds keys to drought and flood resilience, biomass production for fuels, and growth in poor soils. In addition to … its seeds attached when picked. Wild plants will ‘shatter’ their seeds off a stem to distribute them, but domesticated … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … Moreover, the team says the approach they used to validate their set of guide RNAs could be applied to other …
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Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
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Genomewide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the polypore species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, … scientists around the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks …
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Busting the Unbreakable Lignin
… shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … the remaining components into  biofuels and bioproducts. If anaerobic fungi could be used to effectively modify … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …
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