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Picking Up Threads of Cotton Genomics
… the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the …
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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( Panicum … of scientists made an ambitious plan to begin to link the plant’s varying traits — height, biomass, hardiness to cold, …
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User Executive Committee Charter
… The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE … Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant microbiome. They also took …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of … only “true fungi”? A(nswer): Our focus is on fungi, algae, plants, and the microbial world but we also annotated … there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from …
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Help from Citrus’ Bitter, Hardier Cousin
… orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now disseminated around the … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors of the  recent study …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants coordinate their gene expression with light and …
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From Competition to Cooperation
… evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how fungi that feed … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the fungal genomes used in the study are available on the JGI fungal portal  MycoCosm . The work builds upon several …
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Integrating Experimentation with Data
… $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … The JGI and EMSL are U.S. Department of Energy (DOE) Office of … advanced experimental and informatic tools at no cost. The JGI and EMSL are supported by the DOE's Biological and …
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Leadership
… the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … our planet encode these functions in their genomes, and the JGI is uniquely positioned to combine sequencing, DNA … up new ways to harness biology. This new plan positions JGI at the forefront of environmental genomics and sets …
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Computationally Classifying Fungal Lifestyles
… nutrients from decaying organic matter (saprobes), and many plant pathogens known to infect most major food crops and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved …
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