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Metagenomic Analysis of Subtidal Sediments from Polar and Subpolar Coastal Environments Highlights the Relevance of Anaerobic Hydrocarbon Degradation Processes
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Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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User Executive Committee Charter
… The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice … to Chair, and the Chair will become Past Chair. This structured progression establishes a multi-year leadership …
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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering Group lead.   The group is responsible for developing and … the JGI as an Instrumentation Engineer where he added structure and process to the group by developing SOPs for … BS in BioEngineering, University of California, Berkeley …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study … also supports various CSP and FICUS user projects for the Metagenome Program. …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… A wide array of invited speakers shared how research infrastructure – DNA sequencing, synthesis, metabolomics, data … address of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, … to be wildly divergent among sample sites. “Many of these sequences are no more similar than random,” Holmes said. …
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The Case for Conservation
… How sex chromosomes “older than dinosaurs” could help improve … with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … continue to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … features and functions. Making connections between the structures and functions of the genes encoded in the genome … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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