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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … example, SIP experiments can show how soil microbes cycle nitrogen and carbon, or how freshwater ecosystems process …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to … for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy … Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, …
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding … directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their … et al. 2016. SAR11 bacteria linked to ocean anoxia and nitrogen loss. Nature 536, 179-183. Ivanova et al. 2014. … User Programs … Education … Awards and Service … Selected Publications …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it comes to …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific contribution? …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … ecology. They store carbon and cycle key nutrients like nitrogen and phosphorus.  This way, the fungi of forest …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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