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Frederik Schulz
… eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to find novel functions that may impact microbiome structure … Nature Biotechnology 37, 29–37. Schulz et al. (2017) Towards a balanced view of the bacterial tree of life. …
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Trent Northen
… 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of … is the Metabolomics Science Program Head at the JGI. Click to learn more about the program's areas of focus, major …
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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Promoting the Power of Viral Metagenomics
… published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by … early 2020, people all over the world have been forced to confront the awesome power that viruses have to affect …
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JGI Hosts GPU Hackathon in May
… (JGI), a DOE Office of Science user facility, aims to explore applications in the life sciences that can be ported to the GPU architecture. A GPU hackathon is a five-day … is one of the largest producers of environmental genomics data and has a strong reputation in the community,” said JGI …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… [Pictured from left to right are: [Above] Sara Branco, Asdrubal Burgos, Posy … [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and Sheree Yao. … (NEON) in collaboration with the National Microbiome Data Collaborative (NMDC) to produce open metagenomics data. …
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Building Wet and Dry Lab Skills
… the second year of Alabama A&M University students coming to the DOE Joint Genome Institute for research and training … interns Tamyra Long and Zyiah Mikes worked with mentors Yi Zhai and John Vogel from the Plant Functional … the User Support Analysis team to analyze plant microbiome data via programming languages like Python. The more …
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Charting Progress toward Professional Goals
… at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of STEM … with an experienced researcher who serves as their mentor. By contributing to projects that will help them build … invaluable scientific and technical experiences.  Genomic data scientist Deanna Beatty sat down with interns hosted at …
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PhycoCosm Tutorial
… interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US …
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High-Quality Draft Nuclear and Mitochondrial Genome Sequence of Fusarium oxysporum f. sp. albedinis strain 9, the Causal Agent of Bayoud Disease on Date Palm.
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2023 Progress Report
… we provide advanced genomic capabilities, large-scale data, and professional expertise to support the global research community in studies of … and environmental systems. We optimize our service to the community through responsibly managing our people and …
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