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JGI Hosts GPU Hackathon in May
… processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the Oak Ridge … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the … “JGI is one of the largest producers of environmental genomics data and has a strong reputation in the community,” …
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IMA genome-F18
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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
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Gene Expression: From On-Off Switch to Dial
… gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library … published in the  Proceedings of the National Academy of Sciences (PNAS), offers more ways for scientists to explore … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Complete genome sequence of Desulfohalobium retbaense type strain (HR100T)
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Expanding Virophage Diversity
… viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid proteins (MCP … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of known high … an early version of the paper at the 2018 Viral EcoGenomics & Applications (VEGA) Symposium. The work also used …
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Forming Scientific Connections and Building Community
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three undergraduates and seven … who were able to give me some guidance in my academic journey.” Mentors: Deze Kong & Yasuo Yoshikuni Project: “ … Sajeet Haridas & Asaf Salamov Project: “ Improving the JGI fungal mitochondrial annotation pipeline ” Anna Kucherova : …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to … But not all scientists have the expertise and resources to do DNA design and synthesis work. This is where … their collaborations. One review article in the collection, Genomics-enabled analysis of specialized metabolism in …
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Introducing New Members of the JGI User Executive Committee
… collaborators and other scientific organizations. Fungal biologist Stajich from UC Riverside sees the JGI’s … and education communities access and build on the JGI’s resources. The UEC represents the JGI user community and is … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … releasing fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. …
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Better Crops With a Pointillist Approach to Plant Genomics
… could help us grow better crops, with less impact on our planet. …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… to the worldwide scientific community through its  User Programs on a competitive, peer-reviewed basis. Speakers and … a keynote speaker addressed the conference, sharing the journeys of their research careers, and showcasing the broad … of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, introduced Bruce …
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