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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and … impact the regulation of global nutrient cycles. The JGI’s latest strategic plan (download a copy  here ) …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) … One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) … the University of Duisburg-Essen in Germany in 2024 and 2025.  Participants from the UDE were Alexander Probst, …
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Busting the Unbreakable Lignin
… plant for energy: Cellulose, hemicellulose and lignin, cumulatively called lignocellulose, are the primary components of … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential … Michigan State University). The work (proposal: 10.46936/10.25585/60000889) conducted by the U.S. Department of Energy …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … are even less known than DNA viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as …
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Gene Expression: From On-Off Switch to Dial
… library approach to tuning gene expression in metabolic pathways. Compared to the traditional way, which leverages an … systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors of the  recent study …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Natalia Ivanova, senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against infections — using surprisingly few … as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. … Institute Community Science Program (JGI-CSP) grant (CSP2568 to P.Z., ES and AH), and by a fellowships provided by …
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Green Algae Reveal One mRNA Encodes Many Proteins
… in eukaryotes was long held to be monocistronic – that is, a single gene makes messenger RNA, which encodes a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (FICUS) collaborative science initiative between the JGI and EMSL.  … The U.S. Department of Energy Joint Genome …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the ERD process.  … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of Energy …
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Tracking the Origins of Methane-Producing Microbes
Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the Emerging …
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