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Steven Wilson
… Group lead.   The group is responsible for developing and supporting applications that span the lifecycle of activities at JGI - proposal submission and review, project and work order creation and management, …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as … the widespread adoption of Brachypodium distachyon as an experimental model for the grasses. In addition to this fundamental work, he established an efficient switchgrass transformation pipeline and, in …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing collaboration is available for licensing. The … describe a strategy to recover high value products from human waste. They   genetically modified yeast to efficiently … hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. … in learning more about the fungal endophytes of soybean and how they deter two significant pathogens, the soybean cyst … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Taking Stock of the Known and Unknown Microbial Space
… microbial diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an … into over 1.8 million bacterial and archaeal genomes to see how much of their diversity we've actually captured,” said … the known diversity of microbial genomes in the datasets, however, the team added that this information is still …
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Silver age of GOLD introduces new features
… making curated microbiome metadata that follows community standards freely available, and enabling large-scale comparative genomics analysis initiatives. GOLD not only curates sequencing …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… details of life’s genetic blueprint has long been a significant challenge in genomics. Enter GenomeOcean, a powerful … its enhanced neural network architecture, GenomeOcean has shown improved computational efficiency of its modeling in … on reference genomes to train genome foundation models. However, the sheer vastness of microbial diversity is not …
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JGI-UC Merced Interns Share Their 2021 Experiences
… research projects, hone science presentation skills, and participate in professional development enrichment … others further along in their academic career enjoyed the chance to develop new skills needed for their PhD research. And for the first time in this program’s history, two …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… This is excerpted from the full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire … Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network (ESnet) have been recognized for outstanding achievements in science, technology, and …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Energy. Students also worked with their mentors to practice and develop presentation skills as well as build their network in the field of genomics and scientific research. The topics students worked on … JGI also hosted events to enable students to showcase their work and even a celebratory toast at the end …
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JGI Hosts GPU Hackathon in May
… in graphical processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over half the total global methane … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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