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A Step Toward Controlling Soybean Rust
Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien … soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… on the symbiotic relationship between mycorrhizal fungi and plant roots.  …
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What Happens Underground Influences Global Nutrient Cycles
… alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her colleagues have generated a … gene functions that may be relevant to both algae and land plants.  Within the biogeochemistry group, one of the four … the role of viruses in the soil microbiome. Another accepted proposal in the inter-organismal interactions focus …
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MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes.
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2024 Progress Report
… with a record output of products, making data easier to access and use, and by investing in the latest advanced genomic capabilities to … The organisms on our planet encode these functions in their genomes, and the JGI is uniquely positioned to combine …
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The Power of One, Amplified
… the value of conducting large-scale single cell genomics by collecting nearly 500 single cells from a single low diversity hot spring sediment sample. Their work showed that single cell genomics can add … that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with …
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Annual Genomics of Energy & Environment Meeting
Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of … technology developments – that the JGI offers through proposal calls on a competitive, peer-reviewed basis to the …
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … as carbon, nitrogen and sulfur are themselves regulated by viruses in their environments. Environmental DNA … data, which limits the ability of researchers to accurately perform functional assessment, host prediction, …
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I-Min (Amy) Chen
… data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in 2006, she was Director of Application Development Systems at … platforms for gene expression data, one of the most successful data management systems of their kind, deployed to …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from … Below find a list of the nine researchers accepted for 2024. Proposals are accepted year-round; the next deadline …
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From Textbook to Real World Applications
… of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more …
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The Genome Portal of the Department of Energy Joint Genome Institute
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