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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal … Goal = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† … hours. Other DOE Quarterly Metrics Q1 – Report on new computational developments for improving microbial, …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers … organisms as had been originally thought. The Impact The Antarctic lakes are a “treasure trove” of unknown microbes … JGI is sequencing large numbers of microbes and microbial communities that contribute to carbon cycling, and is …
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Extracting the Secrets of Secondary Metabolites
… CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … edits affect functionality.  CRAGE allows for the transplanting of these BGCs from one organism into an alternate …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal … and professors in laboratory techniques and data analyses compile original data for improving fungal genomic resources …
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Synthesis
… Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes … of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate methods …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold … array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  researchers … This work was funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and …
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, … most widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of … of wine, terpenes are ubiquitous. A diverse group of plant-produced organic compounds, terpenes play key roles in plant growth, defense, … work was supported by the Australian Research Council (grant numbers DP140102552, DP110101621), and an Australian …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… Edward Lu and mentor Miguel Romero Sean Saki and mentors  Zhong Wang and Bryce Foster Sivagunalan Thamilarasan and … me to the future.  Shari Larsen : I didn’t grow up with computers, and it seems like my younger counterparts are a … Saki : Yeah, I think the, the main thing for me is since I want to go to industry a lot sooner, is having the experience …
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Matt Blow
… these teams provide analysis support and R&D for production and user science. He received his Ph.D. from the Wellcome Trust Sanger Institute and Cambridge University … Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental approaches to study genome …
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Team Science Reveals Important Protein in Poplar
… bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein , PtrbHLH011, within poplar involved in plant growth, lignin production, and disease resistance.  The … to produce desirable traits.  Partly enabled by the JGI  Community Science Program New Investigator program , BNL …
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Tina Clarke
… joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in … (JGI). Tina serves in an HR advisory role to Division/Area management and supervisors to recommend solutions and appropriate actions on diverse HR …
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