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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … microbiomes. Scientists conducted a shotgun metagenomic survey on three types of conifers–limber pine, … site exerting the stronger influence. Although no single environmental variable explained these differences, …
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the JGI, received a message from Andrea …
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The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation
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Metagenomes and Metagenome-Assembled Genomes from Microbiomes Metabolizing Thin Stillage from an Ethanol Biorefinery
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research … years where he was a driving force behind the development of numerous genomic resources that fostered the widespread adoption of … to experimental manipulation in the laboratory because of its compact genome, diploid nature, self compatibility, …
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Fungal diversity and function in metagenomes sequenced from extreme environments
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users … chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under … salt triggers this metabolic shift, the team combined RNA sequencing across multiple time points with Cappable-seq, a …
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High-resolution genetic mapping of allelic variants associated with cell wall chemistry in Populus
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Exometabolomics and MSI: deconstructing how cells interact to transform their small molecule environment
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Mobile MUTE specifies subsidiary cells to build physiologically improved grass stomata
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Establishing a versatile toolkit of flux enhanced strains and cell extracts for pathway prototyping
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