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Refining the Process of Identifying Algae Biotechnology Candidates
… stresses, and its transcriptome to learn more about which genes expression patterns. The analysis led to the identification of several transcription factor regulating genes and enzymes that can modify composition of algal …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional annotation and methylomics) that …
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Tracking the Origins of Methane-Producing Microbes
… methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … and, acetoclastic. All three pathways require the gene cluster for methane production known as Mcr. Until recently, the Mcr gene cluster was found only in the archaeal lineage …
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Synthesis
… into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, … DNA Synthesis platform enables users to validate hypotheses generated from mining genomic data by designing and …
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JGI@25: The Little Alga That Could
… of both plant and animal cells, it shares nearly 7,000 genes with other organisms (a third of those shared by both … and flowering plants). Its genome also contains hundreds of genes uniquely associated with carbon dioxide capture and the generation of biomass, making Chlamydomonas (affectionately …
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Daniel Udwary
… of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and fungi. Prior to joining the …
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Natural Prodcast Episode 8: Eric Schmidt
… see as the overall “theme” of your research? I know you’ve generally worked in various marine organisms. Except during … really need to know how they’re made. You need to bring the genes into the lab, and you need to manipulate them in the … products made by animals, which is highly unusual, as it’s generally considered that it’s the bacteria living in …
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A Community Resource for Secondary Metabolite Researchers
… secondary metabolites are produced by groups of genes known as biosynthetic gene clusters (BGCs.) As reported in the recent Database … system known as IMG-ABC. That portal contained biosynthetic gene clusters and secondary metabolites information from …
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Fungal Friends or Foes in Plant Roots
… plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act as … genomes on the JGI data portal MycoCosm . They looked for genes known to be involved in fungal-host interactions and identified 84 gene families that were common in fungi that live within …
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A Plantiful Future: Xiaohan Yang
Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of …
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JGI announces 2023 CSP Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… on, from the myriad of omics analyses for understanding gene expression in plants and the environment, to the JGI’s … in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in 2018. …
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