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Self-Buffering system for Cost-Effective production of lactic acid from glucose and xylose using Acid-Tolerant Issatchenkia orientalis
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Powdery mildew induces chloroplast storage lipid formation at the expense of host thylakoids to promote spore production
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing … Check out our organism-agnostic CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … Over the last year, the U.S. Department of Energy Joint Genome Institute has continued its journey to realize our … Our primary objective is to serve our user community with large-scale advanced …
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Cataloging the Microbes that Manage the Health of River Systems
… Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … United States. They also provided multiple access points to the information. The team harnessed a community-science … nutrient flows that the microbes in these bodies of water help regulate. However, the microbes also interact with …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … mgm.jgi.doe.gov   This highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… efficiency for users requiring multiple omics methods to examine microbial chemical production. The Science Soil bacteria in the genus … Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … This work conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office …
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How Maize Makes An Antibiotic Cocktail
… at least 15 zealexins, they suspect there are even more to find. Zealexins are produced in every corn variety and protect maize by fending off fungal and microbial infections. Scientists had assumed that … synthesized by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s … of its flagship education program with UC Merced. JGI Director Nigel Mouncey and program organizers Wang, Visel and … illness, disease risk, and treatment response due to fungal genomics internship with Igor Grigoriev. Portia Mira …
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JGI@25: From Life at the Extremes to Editing Genomes
… that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … Combining forces with UC Berkeley to seek elusive gene-editing proteins …
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A Plant Root Atlas for Tracking Developmental Trajectories
… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “This represents the largest … with the JGI’s growing efforts in establishing plant and fungal single-cell and spatial transcriptomic technologies, …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and organisms than … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the … Lake Mendota is told as part of a three-part series of our  Genome Insider podcast .    ( Subscribe to Genome Insider …
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