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Natural Prodcast
… to medicine, the environment, and human health. As the JGI acts on its goals in — and builds out its capabilities for — secondary metabolism research, “Natural Prodcast” … of communication to the scientific community. Host Dan Udwary talks to luminaries in the field about current and …
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A Step Toward Controlling Soybean Rust
The United States  is the world’s leading soybean producer , and soybeans are used to … , Sebastien Duplessis of the French National Institute for Agricultural Research (INRA)  proposed sequencing a … to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome … This year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came … Roux and Frederik Schulz, Structure Prediction to Annotate Novel Viruses: the Case of Polintoviruses Josue Duque and …
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NeLLi — Symposium on New Lineages of Life
… expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial … that facilitate the shift from uncovering microbial novelties to deciphering metabolic and functional … novel microbial lineages, leading to a new appreciation for the extent of diversity. The phylogenetic and functional …
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IMG/VR
JGI's Simon Roux describes the structure and content of the … assembled from metagenomes. He also demonstrates briefly how to leverage novel capabilities of IMG/VR to browse and search through …
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Outreach Stories
Interested in reading more JGI intern and mentor success stories? Read more below. …
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Help from Citrus’ Bitter, Hardier Cousin
… clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have … successfully automated aspects of a commonly-used process for studying microbial communities, with results published …
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
As warm-adapted microbes edge polewards, they’d oust resident … organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary … beneficial findings, like antibiotics, pharmaceuticals, and novel enzymes that function at low temperature.” said Katrin …
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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data … also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department …
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