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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – … species of algae and kept seeing what looked like mistakes by the gene prediction algorithms. I decided to dig in a … of Science User Facility located at Berkeley Lab and the Environmental Molecular Sciences Laboratory (EMSL), a DOE …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, … As a leader in genomics for bioenergy and environmental solutions, the JGI is well-positioned to … and environmental remediation—all priorities identified by the DOE Office of Biological and Environmental Research …
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Jeremy Schmutz
… for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed the … management for the reference eukaryotic genomes produced by the DOE Joint Genome Institute and the collaborative … Lovell, JT et al. 2018. The genomic landscape of molecular responses to natural drought stress in Panicum hallii . …
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JGI@25: Stories from Intern Alumni
… notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Over the past 25 years, the JGI …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant viruses. While … recent study  published in the journal  Nature , a team led by researchers at the U.S. Department of Energy (DOE) Joint … by capturing genomes of uncultivated giant viruses from environmental sequences across the globe, then using these …
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Annual Genomics of Energy & Environment Meeting
… convenes this annual gathering of leaders from diverse disciplines to highlight how they are addressing the world’s most pressing energy and environmental challenges.  The invited talks emphasize how … peer-reviewed basis to the worldwide scientific community can advance your research goals. Keynotes: M. …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… of microbial assemblies, revealing the roles of microbial communities in carbon cycling, in interactions with plants, and as drivers of methane production, nutrient … Tringe is the interim director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data … virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality … as carbon, nitrogen and sulfur are themselves regulated by viruses in their environments. Environmental DNA …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.   Scanning the California oak … The disease is known more commonly as Sudden Oak Death or by its acronym, SOD. Of the dozens of Phytophthora species, …
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JGI@25: Studying Sorghum’s Survival Skills
… notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Sorghum stands out as a candidate … improve the genome’s accuracy, and increase its length by 29.5 Megabasepairs. 2017: Pan-genome analysis of sorghum …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
As part of the JGI’s 25th anniversary celebration, the 2022 … , Former Director of DOE’s Office of Biological and Environmental Research “There are two kinds of scientific … Kuhn in his 25th Anniversary presentation. “Those driven by new tools and those driven by new concepts.” Patrinos …
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2024 Progress Report
… for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we … research community in studies of complex biological and environmental systems. We optimize our service to the … of products, making data easier to access and use, and by investing in the latest advanced genomic capabilities to …
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